Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915727.1_cds_XP_016465494.1_58443
CDS Infomation

[gene=LOC107788329] [db_xref=GeneID:107788329] [protein=regulatory protein NPR5-like isoform X2] [protein_id=XP_016465494.1] [location=complement(join(38119..39084,39801..40280))] [gbkey=CDS]
Sequence

ATGACTCCTGAAGACTCATTAAGAACTCTCTCTTTAGATTATCTCAATCTTCTCATCAAC
GGTCAAGCTTTTAGTGATGTTACTTTCAGTGTTGAAGGTCGTTTAGTTCATGCTCATAGA
TGCATCTTAGCTGCTAGGAGTCTTTTCTTCAGGAAATTCTTTTGTGGGCCAGAGTCGCCT
GTTGGCAGCTGCGGCCCAAGGATAAGCCCCTTTAGTGGCGGGCTTGTCCCGTCGCCGAGG
GGCACGAGTGGTTCACAGGTGATACCTGTGAACACAGTAGGGTATGAAGTTTTCTTGTTG
ATGCTTCAATTTTTGTACAGTGGACAAGTTTCAATTGTTCCACAAAAACATGAACCAAGG
CCTAATTGTGGGGAGAGAAGTTGTTGGCATACACATTGCACCTCAGCCGTTGATCTTGCC
CTTGATACTCTTGCAGCCGCTAGATCTTTTGGTGTTGAACAGCTCGCTTTGCTCACTCAG
AAGCAATTAGCAAGCATGGTGGAGAAGGCTTCAATTGAAGATGTGATGAAAGTTTTAATA
GCTTCAAGAAAGCAAGACATGCACCAACTTTGGACTACTTGTTCTCATTTAGTTGCAAAA
TCAGGCCTCCCACCAGAAATCTTAGCCAGACACATCCCCATTGATGTTGTAGCCAAAATT
GAAGATCTCCGTCTCAAATCCTCCATATCACGAACAAGATCATTAATCCCTCATCACCAC
CACCTCCATCACCACCACGAAATTCCCTCAACCATTGAGCTCGAGGACCAAAAAATTCGA
CGAATGAGACGAGCCCTTGACTCATCCGACGTTGAACTTGTCAAGCTTATGGTAATGGGA
GAAGGTCTAAATCTTGATGAATCTCTCGCATTGCATTATGCTGTGGAGAATTGCAGCCGG
GAAGTAGTGAAAGCGCTACTCGAGCTCGGTGCAGCTGATGTGAACTATCAAGCCGGCCCC
AACGGCAAAAGCCCGCTTCACTTAGCAGCTGAAATGGTGTCACCTGACATGGTGGCGGTT
CTATTGGACCATCATGCTGACCCGAACATTCAAACGATGGATCGGATCACTCCACTCGAT
ATTCTCAGAACCCTAACGTCTGATTTTCTATTTAAGGGTGCTATCCCCGGACTCACTCAC
ATTGAACCGAATAAGTTAAGACTTTGCCTAGAACTTGTTCAATCAGCAGCAATGGTATTT
TCTCGAGAGGAAGGAGAAGCGAATAACAATCCGTCTTCGGATACTATATATCCACATGTT
CGTGAAGATCATAGTTCTACTACAAGCAGTGGGAACAACAATTTGGGAAACTTAAACGTG
GATTCAAGAATGGTGTATTTAAATCTTGGTGCAGCACCTCATCATCAACATGATTGCAGC
AGCAGCCACAATAACCAGAATCCAGCATCAATGTACCATCACCACCACCATTCTCATGAG
TATTAG

Peptide Sequence

PEP ID

XP_016465494.1
PEP Infomation

PREDICTED: regulatory protein NPR5-like isoform X2 [Nicotiana tabacum]
Sequence

MTPEDSLRTLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPESP
VGSCGPRISPFSGGLVPSPRGTSGSQVIPVNTVGYEVFLLMLQFLYSGQVSIVPQKHEPR
PNCGERSCWHTHCTSAVDLALDTLAAARSFGVEQLALLTQKQLASMVEKASIEDVMKVLI
ASRKQDMHQLWTTCSHLVAKSGLPPEILARHIPIDVVAKIEDLRLKSSISRTRSLIPHHH
HLHHHHEIPSTIELEDQKIRRMRRALDSSDVELVKLMVMGEGLNLDESLALHYAVENCSR
EVVKALLELGAADVNYQAGPNGKSPLHLAAEMVSPDMVAVLLDHHADPNIQTMDRITPLD
ILRTLTSDFLFKGAIPGLTHIEPNKLRLCLELVQSAAMVFSREEGEANNNPSSDTIYPHV
REDHSSTTSSGNNNLGNLNVDSRMVYLNLGAAPHHQHDCSSSHNNQNPASMYHHHHHSHE
Y

Transcript Sequence

Gene sequence data has not been registered.